Phylogenetically identified new D. melanogaster genes and coding exons

Newly predicted exons in D.mel, outside of and inside of known genes, were selected, and blast-compared to other species. Dmel predicted exons are classified as valid if they show significant similarity and a high synonymous substitution rate (low Ka_Ks) in one or more other species.

About 1800 new exons were found outside of known gene regions, and 300 inside known gene regions. Classification as new gene or new exon of existing genes is not yet done. This is a preliminary rather than exhaustive search of new Dmel genes. Additional new exons can likely be found by including Dmel-sibling gene predictions. Numbers following each location are the bitscore, match identity%, and Ka_Ks ratio.

ID	dmel	dsec	dsim	dyak	dere	dana	dpse	dmoj
texon1	2L	scaffold_14 381,98,0	chr2L 381,98,0	chr2L 285,93,0.08	scaffold_4929 317,95,0.05	scaffold_12943 190,87,0.04	4_group1 87,80,0.15	scaffold_6500 111,83,0.19
texon2	2L	scaffold_14 369,98,0	chr2L 369,98,0	chr2L 281,92,0.08	scaffold_4929 313,94,0.05	scaffold_12943 186,86,0.04	4_group1 83,87,0.05	scaffold_6500 111,83,0.19
texon5	2L	scaffold_14 95,93,0.5	chr2L 95,93,0.5	NA	NA	NA	NA	NA
texon10	2L	scaffold_14 244,99,0	chr2L 244,99,0	chr2L 188,93,0.83	scaffold_4929 204,95,0.25	scaffold_12943 63,84,2.76	NA	NA
texon13	2L	scaffold_14 349,95,0.87	chr2L 363,94,0.8	chr2L 220,88,0.75	scaffold_4929 238,87,1.07	scaffold_12943 129,95,0.5	4_group3 143,100,0	scaffold_6500 109,96,0.5
texon22	2L	scaffold_14 206,94,0.83	chr2L 222,95,0.25	chr2L 182,91,1.33	scaffold_4929 190,92,2	NA	NA	NA
texon32	2L	scaffold_14 91,98,0	chr2L 105,100,0	chr2L 91,98,0	scaffold_4929 61,97,0	NA	NA	NA
texon33	2L	scaffold_14 198,99,0	chr2L 198,99,0	chr2L 184,100,0	scaffold_4929 168,97,0.5	NA	NA	NA
texon41	2L	scaffold_14 155,97,0.5	chr2L 155,97,0.5	chr2L 129,98,0	scaffold_4929 101,92,0.33	NA	NA	NA
texon46	2L	scaffold_14 303,93,0	chr2L 303,93,0	chr2L 270,92,0.6	scaffold_4929 295,94,2	scaffold_12916 121,100,0	4_group3 127,97,0	scaffold_6500 65,100,0
texon51	2L	scaffold_14 240,97,1	chr2L 232,96,1.5	chr2L 200,93,0.5	scaffold_4929 204,97,1	scaffold_12916 50,100,0	4_group3 50,96,0	NA
texon54	2L	scaffold_14 141,98,0	chr2L 149,100,0	chr2L 125,100,0	scaffold_4929 101,96,0	scaffold_12916 93,98,0	4_group3 48,85,0	NA
texon57	2L	scaffold_14 226,97,1	chr2L 234,98,0.5	chr2L 151,90,0.83	scaffold_4929 184,94,1	scaffold_12916 111,94,0.5	4_group3 50,96,0	scaffold_6500 54,100,0
texon69	2L	scaffold_14 143,98,0	chr2L 143,98,0	chr2L 151,100,0	scaffold_4929 143,98,0	scaffold_12916 103,92,0	4_group3 111,93,0	scaffold_6500 71,86,0
texon72	2L	scaffold_14 287,95,1	chr2L 287,95,1	chr2L 135,97,0	scaffold_4929 119,96,0.5	scaffold_12916 91,100,0	4_group3 77,100,0	scaffold_6328 46,100,0
texon75	2L	scaffold_14 246,99,0	chr2L 238,98,0	chr2L 111,94,0.5	scaffold_4929 133,96,0.25	scaffold_12916 52,94,0	2 44,93,0.5	scaffold_3929 46,93,0.5
texon78	2L	scaffold_5 216,97,0.25	chr2L 216,97,0.25	chr2L 125,96,1	scaffold_4929 99,93,0.5	scaffold_12916 63,100,0	4_group3 58,100,0	NA
texon81	2L	scaffold_5 194,96,0.5	chr2L 147,93,1.25	chr2L 91,85,0.71	scaffold_4929 83,84,0.62	NA	NA	NA
texon84	2L	scaffold_5 129,98,0	chr2L 155,96,0.25	chr2L 93,98,0	scaffold_4929 75,92,0	NA	2 48,93,0.5	scaffold_6500 44,91,0.25
texon89	2L	scaffold_5 165,94,0	chr2L 204,99,0	chr2L 204,99,0	scaffold_4929 204,99,0	scaffold_12913 95,96,0.5	4_group4 93,98,0	scaffold_6500 73,97,0
texon96	2L	scaffold_5 149,100,0	chr2L 155,100,0	chr2L 99,87,0.5	scaffold_4929 97,85,0.33	scaffold_13248 48,96,0	2 44,96,0	scaffold_6680 48,91,1
texon102	2L	scaffold_5 129,100,0	chr2L 129,100,0	chr2L 115,92,0.25	scaffold_4929 99,91,0.25	NA	NA	NA
texon107	2L	scaffold_5 184,95,0	chr2L 200,97,0	chr2L 186,96,0	scaffold_4929 159,95,1	NA	NA	NA
texon110	2L	scaffold_5 268,97,0.5	chr2L 268,97,0.5	chr2L 147,100,0	scaffold_4929 184,92,1.16	scaffold_12913 121,97,0.5	2 46,96,0	scaffold_6473 46,100,0
texon119	2L	scaffold_5 172,96,1	chr2L 172,96,1	chr2L 95,87,0.4	scaffold_4929 121,90,0.33	scaffold_12916 50,87,0.5	4_group4 52,94,0	NA
texon120	2L	scaffold_5 141,100,0	chr2L 141,100,0	chr2L 133,98,0	scaffold_4929 141,100,0	scaffold_12913 79,89,0	4_group4 109,94,0.16	scaffold_6500 65,90,0
texon121	2L	scaffold_5 135,100,0	chr2L 135,100,0	chr2L 127,98,0	scaffold_4929 135,100,0	scaffold_12913 73,89,0	4_group4 103,94,0.16	scaffold_6500 65,90,0
texon122	2L	scaffold_5 323,99,0	chr2L 238,96,1.5	chr2L 307,98,0	scaffold_4929 315,98,0	scaffold_12913 252,94,0.12	4_group4 129,85,0.07	scaffold_6500 151,86,0.37
texon123	2L	scaffold_5 311,95,0.25	chr2L 343,97,0.33	chr2L 287,93,0.1	scaffold_4929 287,93,0.04	NA	NA	NA
texon124	2L	scaffold_5 309,95,1.75	chr2L 341,97,0.75	chr2L 285,93,0.1	scaffold_4929 285,93,0.04	NA	NA	NA
texon133	2L	scaffold_5 240,97,0.5	chr2L 232,96,1	chr2L 65,97,0	scaffold_4929 151,88,0.33	scaffold_12916 71,90,0.5	4_group3 54,91,0.25	NA
texon136	2L	scaffold_5 97,93,0.5	chr2L 105,95,1	chr2L 46,100,0	scaffold_4690 44,100,0	scaffold_12943 46,100,0	2 48,100,0	scaffold_6473 50,100,0
texon138	2L	scaffold_5 105,93,0.75	chr2L 105,93,0.75	NA	scaffold_4929 61,89,0.5	NA	NA	NA
texon141	2L	scaffold_5 222,97,0	chr2L 214,96,0	chr2L 190,94,0	scaffold_4929 206,95,0	scaffold_12916 113,89,0	4_group3 143,89,0	scaffold_6500 119,87,0.03
texon144	2L	scaffold_5 174,98,0	chr2L 182,100,0	chr2L 174,98,0	scaffold_4929 174,98,0	scaffold_12916 151,95,0.16	4_group3 139,94,0	scaffold_6500 127,92,0.08
texon145	2L	scaffold_5 194,99,0	chr2L 186,98,0	chr2L 184,98,0	scaffold_4929 168,96,0	scaffold_12916 170,96,0.16	4_group3 147,93,0	scaffold_6500 105,92,0
texon146	2L	scaffold_5 444,93,0.7	chr2L 474,94,0.87	chr2L 371,91,1.75	scaffold_4929 373,90,0.87	scaffold_12916 93,98,0	4_group3 79,100,0	scaffold_6500 65,97,0
texon148	2L	scaffold_5 634,97,0.62	chr2L 666,97,0.66	chr2L 281,98,0.5	scaffold_4929 531,92,0.5	scaffold_12916 81,97,0	4_group3 75,97,0	NA
texon153	2L	scaffold_5 101,95,0.25	chr2L_random 109,96,0.5	chr2L 109,96,0	scaffold_4929 109,96,0	scaffold_12943 61,87,0	4_group3 44,96,0	NA
texon160	2L	scaffold_5 121,91,0.75	chr2L_random 186,96,1	chr2L 125,93,1	scaffold_4929 115,91,0.66	NA	NA	NA
texon164	2L	scaffold_5 75,91,0.16	chr2L 97,95,0.25	chr2L 71,95,0	scaffold_4929 89,95,0.5	NA	NA	NA
texon167	2L	scaffold_5 303,97,0.12	chr2L 319,98,0	chr2L 176,96,1.5	scaffold_4929 285,94,0	scaffold_12943 119,94,0.5	4_group3 109,90,0.83	scaffold_6500 99,96,0
texon168	2L	scaffold_5 133,100,0	chr2L 125,98,0	chr2L 133,100,0	scaffold_4929 133,100,0	scaffold_12943 77,89,0.08	4_group3 77,90,0	scaffold_6500 61,86,0.06
texon171	2L	scaffold_5 135,97,0.5	chr2L 135,97,0.5	chr2L 125,97,0	scaffold_4929 119,95,1	NA	NA	NA
texon175	2L	scaffold_5 321,94,0.5	chr2L_random 276,91,0.16	chr2L 278,92,0.6	scaffold_4929 266,91,2.51	scaffold_12943 202,96,0.5	4_group3 168,95,0.25	scaffold_6500 79,92,0.5
texon187	2L	scaffold_5 180,93,0.5	chr2L 180,93,1	chr2L 121,98,0	scaffold_4929 127,100,0	scaffold_12943 83,97,0	4_group3 75,100,0	scaffold_6500 71,100,0
texon189	2L	scaffold_5 182,94,0.25	chr2L 167,93,0.25	chr2L 125,88,1	scaffold_4929 101,85,1	scaffold_12943 63,95,0.5	4_group3 56,92,0.25	scaffold_6500 54,96,0
texon191	2L	scaffold_5 165,98,0	chr2L 172,100,0	chr2L 165,98,0	scaffold_4929 165,98,0	scaffold_12943 115,94,0	4_group3 61,83,0.08	scaffold_6496 46,96,0
texon192	2L	scaffold_5 272,100,0	chr2L 272,100,0	chr2L 248,97,0.25	scaffold_4929 256,98,0	scaffold_12943 230,96,0	4_group3 192,92,0.05	NA
texon198	2L	scaffold_5 3213,96,2.23	chr2L 2924,97,1.08	chr2L 2266,94,2.83	scaffold_4929 2672,95,0.11	scaffold_12916 573,85,3.81	4_group3 145,96,0	scaffold_6500 149,95,0.16
texon203	2L	scaffold_5 129,94,0.75	chr2L 137,95,1.5	chr2L 107,96,0.5	scaffold_4929 151,94,0.75	scaffold_12916 89,96,0.5	4_group1 52,94,0	scaffold_6500 56,100,0
texon204	2L	scaffold_5 375,95,0.66	chr2L 398,96,0.16	chr2L 163,92,1	scaffold_4929 139,94,0.75	scaffold_12916 129,97,0	4_group1 103,92,0.1	scaffold_6500 63,97,0
texon205	2L	scaffold_5 230,97,0	chr2L 248,97,0	chr2L 230,93,0	scaffold_4929 131,98,0	NA	NA	NA
texon209	2L	scaffold_5 176,92,0.1	chr2L 161,98,0	chr2L 75,97,0	scaffold_4929 170,96,0.5	scaffold_13266 46,96,0	2 46,96,0	NA
texon226	2L	scaffold_5 155,98,0	chr2L 145,97,0	chr2L 97,95,1	scaffold_4929 99,95,0.25	NA	NA	NA
texon228	2L	scaffold_5 220,98,0	chr2L 220,98,0	chr2L 204,96,0	scaffold_4929 180,94,0.2	scaffold_12916 65,90,0	NA	NA
texon230	2L	scaffold_5 161,90,0.8	chr2L 184,92,1.16	chr2L 61,81,0.5	scaffold_4929 67,81,0.54	NA	NA	NA
texon231	2L	scaffold_5 99,89,0.25	chr2L 123,93,0.5	chr2L 99,90,0.83	scaffold_4929 81,87,1.16	NA	NA	NA
texon232	2L	scaffold_5 236,94,0.07	chr2L 212,92,0.05	chr2L 165,88,0.44	scaffold_4929 129,87,1.1	NA	NA	NA
texon233	2L	scaffold_5 260,93,1.5	chr2L 276,94,0.12	chr2L 180,87,0.5	scaffold_4929 125,83,0.35	NA	4_group4 50,91,0	NA
texon236	2L	scaffold_5 196,99,0	chr2L 188,98,0	chr2L 176,97,0.25	scaffold_4929 151,94,0.5	NA	NA	NA
texon237	2L	scaffold_5 212,91,1.83	chr2L 236,93,2.26	chr2L 81,86,1	scaffold_4929 125,89,0.87	NA	NA	NA
texon240	2L	scaffold_5 143,92,1	chr2L 135,91,0.5	chr2L 83,94,1	scaffold_4929 95,100,0	scaffold_12916 61,93,0.25	4_group1 60,100,0	scaffold_6500 67,100,0
texon243	2L	scaffold_5 194,98,0.5	chr2L 202,99,0	chr2L 170,95,0.12	scaffold_4929 172,96,0	NA	4_group5 91,85,0.33	scaffold_6500 65,87,0.16
texon259	2L	scaffold_3 107,90,2	chr2L 115,92,0.5	chr2L 75,88,0.5	scaffold_4929 95,90,0.66	scaffold_12916 52,85,1	NA	NA
texon262	2L	scaffold_3 967,95,1.43	chr2L 952,95,1.92	chr2L 698,90,1.35	scaffold_4929 745,91,1.38	scaffold_12916 163,84,0.18	4_group5 60,90,0	scaffold_6500 135,83,0.39
texon266	2L	scaffold_3 240,97,0.5	chrU 170,96,0.5	chr2L 139,88,1.5	scaffold_4929 89,100,0	scaffold_12916 89,100,0	4_group5 44,100,0	scaffold_6500 48,96,0
texon267	2L	scaffold_3 163,100,0	chr2L 163,100,0	chr2L 155,98,0	scaffold_4929 155,98,0	scaffold_12916 103,91,3.02	4_group1 127,95,0	scaffold_6500 127,95,0
texon268	2L	scaffold_3 305,98,0.5	chr2L 313,99,0	chr2L 274,96,0.5	scaffold_4929 281,96,0.33	scaffold_12916 157,90,0.22	4_group1 127,92,0.08	scaffold_6500 73,97,0
texon270	2L	scaffold_3 1118,96,1.8	chr2L 1174,97,3.49	chr2L 710,88,0.27	scaffold_4929 807,90,0.34	scaffold_12943 48,81,0.14	4_group2 129,82,0.19	scaffold_6500 65,80,0.09
texon279	2L	scaffold_3 129,100,0	chr2L 129,100,0	chr2L 113,96,0.5	scaffold_4929 123,100,0	scaffold_12916 46,89,0.25	NA	NA
texon291	2L	scaffold_3 186,90,0.75	chr2L 252,97,0.5	chr2L 218,96,0.5	scaffold_4929 232,98,0.5	scaffold_12916 81,92,0.5	4_group3 111,88,0.5	scaffold_6500 56,100,0
texon293	2L	scaffold_3 428,99,0.5	chr2L 444,100,0	chr2L 373,96,0.07	scaffold_4929 396,97,0	scaffold_12916 305,92,0.03	4_group3 274,90,0.03	scaffold_6500 226,88,0.07
texon294	2L	scaffold_3 222,98,0.5	chr2L 230,99,0	chr2L 101,92,0.16	scaffold_4929 165,93,1	scaffold_13337 56,100,0	2 48,93,0.5	NA
texon299	2L	scaffold_3 168,100,0	chr2L 161,98,0	chr2L 123,95,0.25	scaffold_4929 125,98,0	scaffold_12916 93,94,1	4_group3 101,91,0.37	scaffold_6500 95,96,0
texon301	2L	scaffold_3 278,98,0	chr2L 270,97,0	chr2L 262,97,0	scaffold_4929 270,97,0	scaffold_12916 188,92,0.05	4_group3 182,90,0.04	scaffold_6500 99,84,0.02
texon302	2L	scaffold_3 157,100,0	chr2L 157,100,0	chr2L 149,98,0	scaffold_4929 157,100,0	scaffold_12916 109,92,0.1	4_group3 117,93,0.33	scaffold_6500 109,92,0.25
texon311	2L	scaffold_3 190,100,0	chr2L 190,100,0	chr2L 159,95,0.5	scaffold_4929 151,97,0	scaffold_12916 87,86,2.76	4_group1 79,85,0.13	NA
texon312	2L	scaffold_3 258,95,0.2	chr2L 266,96,1	chr2L 159,87,0.75	scaffold_4929 163,92,0.83	scaffold_12916 75,94,1	NA	NA
texon315	2L	scaffold_3 369,91,0.28	chr2L 369,91,0.28	chr2L 89,92,0	scaffold_4929 172,83,0.54	NA	NA	NA
texon319	2L	scaffold_3 113,92,0.25	NA	chr2L 87,100,0	scaffold_4929 101,98,0	scaffold_12943 69,95,0	4_group3 48,93,0	scaffold_6500 56,96,0
texon327	2L	scaffold_3 297,97,1.5	chr2L 313,98,0	chr2L 135,96,0.25	scaffold_4929 93,91,0.5	NA	NA	NA
texon329	2L	scaffold_3 147,96,0	chr2L 155,97,0	chr2L 123,94,0.16	scaffold_4929 115,91,0.37	scaffold_12916 56,92,0	4_group3 54,85,0.06	NA
texon330	2L	scaffold_3 329,94,1.33	chr2L 331,94,0.3	chr2L 266,90,0.55	scaffold_4929 297,92,0.12	NA	NA	NA
texon331	2L	scaffold_3 626,99,1	chr2L 620,98,0	chr2L 365,96,0.5	scaffold_4929 377,97,0	scaffold_12916 234,94,0.37	4_group5 182,97,0	scaffold_6500 125,96,0.25
texon335	2L	scaffold_3 79,92,0.5	chr2L 87,95,0	NA	scaffold_4929 60,94,0.5	NA	NA	NA
texon336	2L	scaffold_3 119,92,1	chr2L 113,89,1.5	chr2L 109,96,0	scaffold_4929 111,91,3.02	scaffold_12916 48,100,0	NA	NA
texon337	2L	scaffold_3 206,97,0	chr2L 198,96,0.16	chr2L 117,87,0.6	scaffold_4929 172,93,1.25	scaffold_12916 50,100,0	NA	NA
texon348	2L	scaffold_3 168,90,0.66	chr2L 168,90,0.66	chr2L 81,92,0.16	scaffold_4929 141,98,0	scaffold_12916 63,97,0	2 44,100,0	scaffold_2204 46,100,0
texon349	2L	scaffold_3 728,98,0.75	chr2L 706,98,0.66	chr2L 345,97,0.75	scaffold_4929 291,92,0.38	scaffold_12916 139,98,0	4_group5 97,95,1	scaffold_6500 125,98,0
texon352	2L	scaffold_3 198,99,0	chr2L 206,100,0	chr2L 206,100,0	scaffold_4929 206,100,0	scaffold_12916 73,95,0.5	4_group5 73,93,1	scaffold_6500 69,100,0
texon355	2L	scaffold_3 139,96,0.5	chr2L 129,96,0.25	chr2L 129,94,0.12	scaffold_4929 129,95,0	NA	4_group5 44,89,0.5	NA
texon359	2L	scaffold_3 327,97,0.16	chr2L 327,97,0.16	chr2L 289,93,0.25	scaffold_4929 289,93,0.25	scaffold_12916 54,100,0	4_group5 67,95,0	scaffold_6500 69,97,0
texon371	2L	scaffold_3 749,90,0.61	chr2L 733,89,0.64	chr2L 389,83,1.07	scaffold_4929 450,85,0.5	NA	NA	NA
texon372	2L	scaffold_3 424,92,0.63	chr2L 424,92,0.75	chr2L 264,85,0.93	scaffold_4929 331,88,0.63	NA	NA	NA
texon373	2L	scaffold_3 192,99,0	chr2L 208,100,0	chr2L 208,100,0	scaffold_4929 208,100,0	scaffold_12943 153,93,0.08	4_group1 133,91,0.14	scaffold_6500 91,87,0.05
texon381	2L	scaffold_3 186,96,0.5	chr2L 186,96,0.5	chr2L 153,93,0.37	scaffold_4929 141,93,0.5	scaffold_12943 105,96,0.5	4_group3 85,97,0	scaffold_6500 75,94,1
texon393	2L	scaffold_3 127,94,0.12	chr2L 129,95,0	chr2L 77,95,0	scaffold_4929 87,97,0	NA	NA	NA
texon394	2L	scaffold_3 184,97,0	chr2L 200,99,0	chr2L 184,97,0	scaffold_4929 184,97,0	scaffold_12916 121,89,0	4_group3 81,85,0.03	scaffold_6500 123,89,0.05
texon397	2L	scaffold_3 91,100,0	chr2L 91,100,0	chr2L 71,95,0	scaffold_4929 81,96,0	NA	XL_group1e 44,96,0	NA
texon399	2L	scaffold_3 127,100,0	NA	chr2L 119,98,0	scaffold_4929 119,98,0	scaffold_12916 95,98,0	4_group3 87,92,0	scaffold_6500 56,88,0
texon400	2L	scaffold_3 131,100,0	chr2L 131,100,0	chr2L 131,100,0	scaffold_4929 131,100,0	scaffold_12916 123,100,0	4_group3 99,95,0.25	scaffold_6500 67,88,0.2
texon401	2L	scaffold_3 272,99,0	chr2L 272,99,0	chr2L 248,97,0	scaffold_4929 248,97,0	scaffold_12916 176,90,0.09	4_group3 123,86,0.14	scaffold_6500 75,82,0.08
texon402	2L	scaffold_3 258,100,0	chr2L 258,100,0	chr2L 234,97,0.25	scaffold_4929 234,97,0	scaffold_12916 176,92,0	4_group3 131,87,0.03	scaffold_6500 99,85,0.03
texon403	2L	scaffold_3 240,97,0	chr2L 256,98,0	chr2L 232,96,0	scaffold_4929 224,95,0	scaffold_12916 149,88,0.07	4_group3 123,86,0.1	scaffold_6500 89,87,2.26
texon404	2L	scaffold_3 272,98,0	chr2L 256,97,0	chr2L 256,97,0.16	scaffold_4929 246,96,0.12	scaffold_12916 174,90,0	4_group3 113,84,0.11	scaffold_6500 85,82,0.13
texon405	2L	scaffold_3 248,97,0.16	chr2L 256,97,0	chr2L 248,97,0	scaffold_4929 256,97,0.25	scaffold_12916 103,95,0	4_group3 58,88,0	scaffold_6500 52,86,0.07
texon410	2L	scaffold_3 174,100,0	chr2L 174,100,0	chr2L 167,98,0	scaffold_4929 167,98,0	scaffold_12916 119,93,0	4_group3 71,85,0.22	NA
texon412	2L	scaffold_3 190,97,0.25	chr2L 174,95,0.33	chr2L 190,97,0	scaffold_4929 174,95,2	scaffold_12916 67,84,0.18	4_group3 67,85,0.1	NA
texon414	2L	scaffold_3 204,96,0.16	chr2L 188,94,0.1	chr2L 153,92,0.06	scaffold_4929 149,91,0.33	NA	NA	scaffold_6500 46,93,0
texon415	2L	scaffold_3 264,91,0.03	chr2L 287,93,0	chr2L 208,88,2.51	scaffold_4929 216,88,0.21	NA	NA	NA
texon416	2L	scaffold_3 464,98,0.16	chr2L 464,98,0.16	chr2L 311,90,0.17	scaffold_4929 280,88,0.16	NA	NA	NA
texon428	2L	scaffold_3 398,95,0.7	chr2L 430,97,0.33	chr2L 359,97,0.75	scaffold_4929 321,95,0.37	scaffold_12916 121,95,1	2 48,87,0.5	scaffold_6500 91,96,0
texon440	2L	scaffold_3 297,97,2	chr2L 297,96,0.25	chr2L 188,97,0.25	scaffold_4929 198,93,0.25	scaffold_12916 65,100,0	4_group3 60,100,0	scaffold_6500 52,100,0
texon449	2L	scaffold_3 99,95,1	chr2L 99,95,1	chr2L 69,100,0	scaffold_4929 65,95,0.5	scaffold_12916 69,100,0	NA	scaffold_6500 48,100,0
texon457	2L	scaffold_3 95,95,1	chr2L 103,96,0.5	chr2L 87,97,0	scaffold_4929 87,93,0.5	scaffold_12916 48,100,0	4_group3 52,100,0	NA
texon466	2L	scaffold_3 167,90,0.35	chr2L 206,94,0.2	chr2L 190,94,0.37	scaffold_4929 143,88,0.43	NA	NA	NA
texon467	2L	scaffold_3 872,95,0.5	chr2L 872,95,0.5	chr2L 543,88,0.39	scaffold_4929 549,88,0.51	NA	NA	NA
texon485	2L	scaffold_3 448,96,0.83	chr2L 387,95,0.6	chr2L 289,89,0.2	scaffold_4929 226,88,0.21	scaffold_13340 48,100,0	NA	NA
texon497	2L	scaffold_16 301,98,0.5	chr2L 309,99,0	chr2L 168,87,0.66	scaffold_4929 252,94,1.5	NA	NA	NA
texon501	2L	scaffold_16 618,95,0.18	chr2L 622,95,0.33	chr2L 472,91,0.36	scaffold_4929 551,93,0.38	scaffold_12943 60,87,0.16	4_group3 127,81,0.16	NA
texon502	2L	scaffold_16 220,97,0.25	chr2L 220,97,0.25	chr2L 125,89,0.75	scaffold_4929 131,89,2.51	scaffold_12916 60,87,0.3	4_group2 50,90,0.16	NA
texon513	2L	scaffold_16 131,94,2	chr2L 613,99,0.25	chr2L 505,99,0.5	scaffold_4929 597,99,0.25	scaffold_12916 115,98,0	4_group3 101,98,0	scaffold_6500 97,98,0
texon518	2L	scaffold_16 119,100,0	chr2L 119,100,0	chr2L 89,96,0.5	scaffold_4929 83,96,0.5	scaffold_12916 67,95,0	4_group3 79,100,0	NA
texon527	2L	scaffold_16 448,93,1.5	chr2L 660,94,2	chr2L 176,92,2	scaffold_4929 151,100,0	scaffold_12916 99,100,0	4_group4 79,89,0.66	scaffold_6500 89,93,1.49
texon529	2L	scaffold_16 170,97,0.5	chr2L 246,98,0.5	chr2L 119,94,0.16	scaffold_4929 109,90,0.5	scaffold_12929 48,100,0	2 44,100,0	scaffold_6473 46,100,0
texon532	2L	scaffold_16 81,92,0.5	chr2L 89,94,0.25	chr2L 50,96,0	NA	NA	NA	NA
texon535	2L	scaffold_16 315,95,0.62	chr2L 315,95,0.62	chr2L 188,93,1.5	scaffold_4929 242,92,2	scaffold_12916 115,91,0.66	4_group4 85,97,0	NA
texon538	2L	scaffold_16 194,96,1.5	chr2L 190,96,1.5	chr2L 97,90,1.5	scaffold_4929 83,91,0.74	scaffold_12916 83,91,0.12	NA	NA
texon539	2L	scaffold_16 97,98,0	chr2L 115,98,0	NA	scaffold_4929 115,98,0	scaffold_12916 93,96,0.5	4_group4 97,98,0	NA
texon546	2L	scaffold_16 109,90,1.75	chr2L 117,91,0.16	chr2L 83,87,0.28	scaffold_4929 91,87,0.11	NA	NA	NA
texon547	2L	scaffold_16 107,91,1.25	chr2L 99,90,1.49	chr2L 123,93,0.33	scaffold_4929 75,86,0.87	NA	NA	NA
texon548	2L	scaffold_16 149,91,1	chr2L 168,85,0.91	chr2L 67,89,0.5	scaffold_4929 87,88,2	NA	NA	NA
texon549	2L	scaffold_16 349,96,0.66	chr2L 353,96,0.66	chr2L 331,94,0.6	scaffold_4929 297,95,1.25	NA	NA	NA
texon552	2L	scaffold_16 105,95,0.5	chr2L 105,95,0.5	chr2L 85,91,2	scaffold_4929 87,91,0.5	NA	NA	NA
texon553	2L	scaffold_16 418,92,0.5	chr2L 494,96,0	chr2L 210,92,0.83	scaffold_4929 335,88,0.83	scaffold_12943 89,90,1	4_group5 75,97,0	NA
texon560	2L	scaffold_16 48,96,0	chr2L 48,96,0	chr2L 50,93,0	scaffold_4929 58,96,0	NA	NA	NA
texon561	2L	scaffold_16 184,97,0.5	chr2L 190,97,0.25	chr2L 180,97,0	scaffold_4929 206,99,0	scaffold_12943 91,98,0	4_group1 91,98,0	scaffold_6500 67,100,0
texon563	2L	scaffold_16 73,87,0.5	chr2L 75,87,0.83	chr2L 73,87,0.66	scaffold_4929 52,96,0	NA	NA	NA
texon564	2L	scaffold_16 549,94,0.33	chr2L 549,94,0.33	chr2L 303,94,0.5	scaffold_4929 260,96,0.25	scaffold_12943 85,96,0.5	4_group1 63,97,0	NA
texon565	2L	scaffold_16 682,96,0.7	chr2L 632,95,0.71	chr2L 535,94,1.88	scaffold_4929 517,93,1.7	scaffold_12943 117,95,0.25	4_group1 117,97,0	NA
texon571	2L	scaffold_16 440,97,0	chr2L 432,96,0.25	chr2L 404,95,0.75	scaffold_4929 404,96,0.5	scaffold_12943 65,93,0.25	4_group1 105,98,0	scaffold_6500 87,97,0
texon575	2L	scaffold_3 283,98,0.25	chr2L 283,98,0.25	chr2L 182,90,0.7	scaffold_4929 190,90,0.6	scaffold_12916 46,84,0.62	NA	NA
texon579	2L	scaffold_3 301,99,0	chr2L 293,98,0.5	chr2L 244,94,0.5	scaffold_4929 250,96,0.33	scaffold_12916 151,96,0.5	4_group4 101,96,0	scaffold_6500 89,97,0
texon583	2L	scaffold_3 392,96,0.66	chr2L 392,96,0.66	chr2L 385,96,0.83	scaffold_4929 377,95,1	scaffold_12916 291,99,0	4_group4 278,98,0.25	scaffold_6500 236,94,0
texon589	2L	scaffold_3 293,99,0	chr2L 293,99,0	chr2L 278,98,1	scaffold_4929 248,98,0.5	scaffold_12916 143,90,0.83	NA	scaffold_6500 111,90,1.25
texon610	2L	scaffold_3 107,95,0.25	chr2L 107,95,0.25	chr2L 93,93,0.16	scaffold_4929 75,89,0.08	NA	NA	NA
texon615	2L	scaffold_3 335,100,0	chr2L 335,100,0	chr2L 311,98,0	scaffold_4929 303,97,1.49	scaffold_12916 133,91,3.5	4_group1 77,88,0.33	NA
texon638	2L	scaffold_3 283,96,0.16	chr2L 276,95,0.33	chr2L 170,87,0.9	scaffold_4929 184,89,1.12	NA	NA	NA
texon641	2L	scaffold_3 240,93,0.62	chr2L 240,93,0.62	chr2L 204,93,0.83	scaffold_4929 174,97,0.5	scaffold_12916 121,98,0	4_group1 93,95,0.5	scaffold_6500 46,100,0
texon650	2L	scaffold_3 218,98,0.5	chr2L 234,100,0	chr2L 115,86,0.5	scaffold_4929 125,87,0.62	scaffold_12916 52,100,0	NA	NA
texon662	2L	scaffold_3 165,93,1	chr2L 157,92,1.5	chr2L 99,98,0	scaffold_4929 145,90,2	NA	4_group4 48,100,0	NA
texon664	2L	scaffold_3 474,96,0.33	chr2L 470,96,0.21	chr2L 323,89,0.46	scaffold_4929 323,89,0.23	NA	NA	NA
texon672	2L	scaffold_3 212,99,0	chr2L 212,99,0	chr2L 172,94,2.51	scaffold_4929 188,96,1.5	scaffold_12916 157,92,0	4_group4 165,93,0.08	scaffold_6500 137,92,0.07
texon673	2L	scaffold_3 137,96,1	chr2L 159,98,0	chr2L 121,94,0.5	scaffold_4929 121,94,0.5	scaffold_12916 46,100,0	4_group4 46,100,0	NA
texon676	2L	scaffold_3 147,97,0	chr2L 147,97,0	chr2L 147,97,0	scaffold_4929 113,93,0.12	scaffold_12916 103,91,0.08	4_group4 111,92,0.25	scaffold_6500 61,90,0
texon677	2L	scaffold_3 224,100,0	chr2L 224,100,0	chr2L 184,95,0.33	scaffold_4929 224,100,0	scaffold_12916 131,90,2.26	4_group4 145,91,0.33	scaffold_6500 50,96,0
texon681	2L	scaffold_3 212,99,0	chr2L 212,99,0	chr2L 172,94,2.51	scaffold_4929 188,96,1.5	scaffold_12916 157,92,0	4_group4 165,93,0.08	scaffold_6500 137,92,0.07
texon682	2L	scaffold_3 137,96,1	chr2L 159,98,0	chr2L 121,94,0.5	scaffold_4929 121,94,0.5	scaffold_12916 46,100,0	4_group4 46,100,0	NA
texon685	2L	scaffold_3 147,97,0	chr2L 147,97,0	chr2L 147,97,0	scaffold_4929 113,93,0.12	scaffold_12916 103,91,0.08	4_group4 111,92,0.25	scaffold_6500 61,90,0
texon686	2L	scaffold_3 224,100,0	chr2L 224,100,0	chr2L 184,95,0.33	scaffold_4929 224,100,0	scaffold_12916 131,90,2.26	4_group4 145,91,0.33	scaffold_6500 50,96,0
texon691	2L	scaffold_5 93,92,0.33	chr2L 93,92,0.33	chr2L 67,100,0	scaffold_4929 48,84,1.25	NA	NA	NA
texon711	2L	scaffold_5 250,94,1	chr2L 250,94,1	chr2L 272,96,1	scaffold_4929 258,95,0.74	scaffold_12916 143,91,1	4_group4 159,95,0.75	scaffold_6500 89,94,1
texon720	2L	scaffold_7 204,94,0	chr2L 212,100,0	chr2R 188,97,0	scaffold_4845 220,96,0	scaffold_12916 77,84,0.1	2 54,100,0	scaffold_6328 46,100,0
texon724	2L	scaffold_7 232,96,0.16	chr2L 248,98,0.5	chr2R 176,91,0.11	scaffold_4845 200,93,0.16	scaffold_12916 54,87,0.08	4_group3 105,91,0.08	NA
texon726	2L	scaffold_7 234,97,0	chr2L 242,97,0	chr2R 226,96,0	scaffold_4845 234,97,0	NA	4_group3 75,90,0	scaffold_6500 50,84,0.12
texon731	2L	scaffold_7 234,95,0.25	chr2L 266,94,1.25	chr2R 139,90,0.6	scaffold_4845 105,90,0.5	NA	4_group3 65,90,0.5	scaffold_6500 48,100,0
texon732	2L	scaffold_7 502,98,0.25	chr2L 517,99,0	chr2R 400,94,0.4	scaffold_4845 349,92,0.4	scaffold_12916 56,87,0.5	4_group3 89,90,1	NA
texon746	2L	scaffold_7 363,97,0.16	chr2L 363,97,0.16	chr2R 264,91,1.67	scaffold_4845 289,92,0.4	scaffold_12916 60,92,0	4_group4 56,90,0.16	scaffold_6500 56,90,0.5
texon750	2L	scaffold_7 365,95,0.6	chr2L 357,94,0.7	chr2R 270,90,0.87	scaffold_4845 272,90,0.6	NA	NA	NA
texon752	2L	scaffold_7 593,95,1	chr2L 593,95,1.37	chr2R 349,86,0.52	scaffold_4845 268,88,0.29	NA	NA	NA
texon756	2L	scaffold_7 244,95,3.02	chr2L 262,96,2	chr2R 222,95,0.1	scaffold_4845 242,94,0.62	scaffold_12916 54,84,0.11	XR_group6 50,93,0	NA
texon761	2L	scaffold_7 297,98,1	chr2L 289,97,0.5	chr2R 143,86,0.8	scaffold_4845 274,96,0.1	scaffold_12916 95,98,0	4_group4 117,91,0.5	NA
texon762	2L	scaffold_7 105,94,1.5	chr2L 121,97,0.5	chr2R 97,92,0.12	scaffold_4845 105,94,0	NA	NA	NA
texon763	2L	scaffold_7 349,96,1.5	chr2L 381,97,0.5	chr2R 278,93,0.66	scaffold_4845 262,90,0.31	scaffold_12916 117,91,0.5	4_group3 67,87,0.62	NA
texon765	2L	scaffold_7 75,94,0.25	chr2L 75,94,0.25	chrX 60,91,0.16	scaffold_4644 63,93,1	NA	NA	NA
texon768	2L	scaffold_7 208,100,0	chr2L 200,99,0	chr2R 153,93,0.66	scaffold_4845 109,98,0	scaffold_12916 69,97,0	4_group3 63,93,0	scaffold_6500 56,94,0
texon770	2L	scaffold_7 270,98,0	chr2L 270,98,0	chr2R 254,97,0.16	scaffold_4845 262,97,0	scaffold_12916 254,97,0	4_group3 230,95,0	scaffold_6500 226,95,0
texon771	2L	scaffold_7 236,94,0.66	chr2L 260,95,1	chr2R 75,95,0.5	scaffold_4845 117,98,0	scaffold_12916 67,97,0	NA	NA
texon772	2L	scaffold_7 331,89,2	chr2L 355,90,1.62	chr2R 260,86,0.13	scaffold_4845 165,86,0.13	scaffold_12916 50,84,0.75	NA	NA
texon773	2L	scaffold_7 121,98,0	chr2L 113,96,0.5	chr2R 97,93,0.16	scaffold_4845 97,93,0.5	scaffold_12916 50,84,0.75	NA	NA
texon777	2L	scaffold_7 309,97,0.75	chr2L 309,97,0.75	chr2R 260,95,1	scaffold_4845 258,93,1.5	scaffold_12916 153,93,0.5	4_group3 119,90,0.75	scaffold_6500 56,90,0.5
texon779	2L	scaffold_7 396,99,0	chr2L 396,99,0	chr2R 333,95,0.5	scaffold_4845 341,95,1	scaffold_12916 61,89,1	4_group3 48,93,0.5	NA
texon782	2L	scaffold_7 192,100,0	chr2L 137,92,0.66	chr2R 184,98,0	scaffold_4845 176,97,0	scaffold_12916 161,95,0	4_group3 153,95,0	scaffold_6500 103,89,0.12
texon784	2L	scaffold_7 228,97,0	chr2L 212,96,0	chr2R 212,96,0.12	scaffold_4845 228,97,0	scaffold_12916 141,88,0.08	4_group3 135,88,0.08	scaffold_6500 149,89,0.09
texon785	2L	scaffold_7 299,100,0	chr2L 299,100,0	chr2R 291,99,0	scaffold_4845 299,100,0	scaffold_12916 180,97,0	4_group3 139,92,0.07	scaffold_6500 107,89,0.05
texon787	2L	scaffold_7 113,98,0	chr2L 113,98,0	chr2R 91,98,0	scaffold_4845 105,96,0.5	scaffold_12916 65,90,0.75	NA	scaffold_6500 52,96,0
texon792	2L	scaffold_7 119,95,0	chr2L 119,95,0	chr2R 87,90,1.25	scaffold_4845 103,89,0.75	NA	NA	NA
texon796	2L	scaffold_7 174,100,0	chr2L 174,100,0	chr2R 143,95,0.16	scaffold_4845 167,98,0	scaffold_12916 60,100,0	NA	NA
texon797	2L	scaffold_7 190,92,0.66	chr2L 268,93,0.3	chr2R 157,96,0	scaffold_4845 165,97,0	scaffold_12916 46,100,0	NA	NA
texon804	2L	scaffold_7 56,100,0	chr2L 56,100,0	chr2R 46,100,0	NA	NA	NA	NA
texon814	2L	scaffold_7 311,98,0	chr2L 311,98,0	chr2R 232,92,0.5	scaffold_4845 155,98,0	scaffold_12916 77,91,0.33	4_group3 95,95,0	NA
texon823	2L	scaffold_7 127,97,0.5	chr2L 135,97,0.5	chr2R 111,93,2	scaffold_4845 135,97,0.5	scaffold_12916 58,96,0	4_group3 58,96,0	scaffold_6500 58,96,0
texon832	2L	scaffold_7 60,92,0.25	chr2L 123,94,0.5	chr2R 65,97,0	scaffold_4690 46,91,1	scaffold_13337 46,96,0	2 46,93,0.5	scaffold_2842 52,96,0
texon839	2L	scaffold_7 117,97,0.5	chr2L 117,97,0.5	chr2R 69,92,0	scaffold_4845 69,92,0	scaffold_12916 52,96,0	4_group4 58,90,0.5	NA
texon840	2L	scaffold_7 99,96,0.5	chr2L 97,100,0	chr2R 85,91,0.5	scaffold_4845 83,97,0	scaffold_12916 61,93,1	2 50,93,0	scaffold_6328 46,96,0
texon841	2L	scaffold_7 89,94,0	chr2L 103,91,0.12	chr2L 54,89,2	scaffold_4690 60,97,0	scaffold_12613 54,89,0.33	2 60,97,0	scaffold_6308 56,92,0.25
texon847	2L	scaffold_7 141,92,0	chr2L 133,91,0	chr2R 133,91,0.5	scaffold_4845 117,89,0.16	scaffold_12916 71,100,0	XR_group6 44,93,0	NA
texon849	2L	scaffold_7 95,96,0.5	chr2L 115,95,0.25	chr2R 73,92,0.5	scaffold_4845 81,94,1	scaffold_12916 44,96,0	XR_group6 46,100,0	scaffold_6500 48,93,0.5
texon854	2L	scaffold_7 323,98,0	chr2L 323,98,0	chr2R 270,95,0	scaffold_4845 276,95,0	scaffold_12916 204,90,0.1	NA	scaffold_6500 188,88,0.09
texon855	2L	scaffold_7 48,100,0	chr2L 48,100,0	NA	scaffold_4845 46,91,1	NA	NA	NA
texon859	2L	scaffold_7 157,91,0.6	chr2L 157,91,0.6	NA	NA	NA	NA	NA
texon871	2L	scaffold_18 178,98,0	chr2L 178,98,0	chr2R 170,97,0.5	scaffold_4845 178,98,0	scaffold_12916 69,100,0	NA	NA
texon872	2L	scaffold_18 287,97,1.5	chr2L 299,98,0	chr2R 208,91,1.83	scaffold_4845 54,88,0.16	NA	NA	NA
texon876	2L	scaffold_18 371,96,0.5	chr2L 379,95,0.5	chr2R 291,92,0.66	scaffold_4845 301,91,0.5	scaffold_12916 107,92,2	4_group4 61,90,0.33	scaffold_6500 50,93,0.5
texon887	2L	scaffold_18 200,94,0.2	chr2L 208,95,0.1	chr2R 168,91,0.11	scaffold_4845 155,93,0.08	NA	NA	NA
texon889	2L	scaffold_18 272,97,1	chr2L 280,98,0.5	chr2R 200,93,0.3	scaffold_4845 222,95,2.51	NA	4_group3 58,88,0.25	NA
texon891	2L	scaffold_18 172,95,0.75	chr2L 172,95,0.75	chr2R 101,86,3.02	scaffold_4845 48,91,0	NA	NA	NA
texon894	2L	scaffold_18 48,100,0	chr2L 48,100,0	chr2R 44,100,0	scaffold_4845 44,100,0	NA	NA	NA
texon900	2L	scaffold_18 426,95,0.35	chr2L 418,95,0.58	chr2R 321,94,1.33	scaffold_4845 268,97,1.5	scaffold_12916 143,91,0.33	4_group3 135,91,0.62	scaffold_6500 67,92,0.5
texon902	2L	scaffold_18 505,94,1	chr2L 482,93,1.25	chr2R 287,91,0.75	scaffold_4845 355,88,0.88	scaffold_12943 83,85,0.5	NA	NA
texon903	2L	scaffold_18 504,94,1	chr2L 480,93,1.25	chr2R 281,90,0.75	scaffold_4845 349,88,0.88	scaffold_12943 83,85,0.5	NA	NA
texon909	2L	scaffold_28 143,98,0	chr2L 139,94,0.33	chr2R 99,89,1	scaffold_4845 83,90,1	scaffold_12943 58,91,0.5	NA	NA
texon913	2L	scaffold_28 289,98,0.5	chr2L 244,93,1	chr2R 262,95,0.37	scaffold_4845 242,98,0	scaffold_12943 200,99,0	4_group1 127,100,0	scaffold_6500 87,96,0
texon914	2L	scaffold_28 270,98,0.5	chr2L 270,98,0.5	chr2R 226,95,1.25	scaffold_4845 192,94,0.66	scaffold_12943 168,96,0.25	4_group1 141,94,0.5	scaffold_6500 105,95,1
texon915	2L	scaffold_28 174,94,1	chr2L 167,93,1.25	chr2R 99,90,0.83	scaffold_4845 87,88,0.5	NA	NA	NA
texon918	2L	scaffold_28 317,98,0.25	chr2L 325,98,0.5	chr2R 157,90,0.5	scaffold_4845 230,92,0.6	NA	NA	NA
texon919	2L	scaffold_28 172,96,0	chr2L 180,97,0	chr2R 99,96,0.5	scaffold_4845 85,88,1	scaffold_12943 97,94,0.25	4_group1 58,100,0	NA
texon925	2L	scaffold_28 137,94,0.5	chr2L 129,94,1.5	NA	scaffold_4845 127,96,1	NA	NA	NA
texon929	2L	scaffold_28 507,93,2.51	chr2L 359,97,1	chr2R 343,93,0.43	scaffold_4845 176,92,0.08	scaffold_12943 190,87,0.28	4_group1 147,86,2	scaffold_6500 95,100,0