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Drosophila genomes: Proteome match counts

These figures show counts of protein gene matches to genomes. tBLASTn is used to match query proteomes to target genomes. Figures A show matches at significance level p <= 1e-10, while figures B have match significance of p <= 1e-3. Figure A1 counts full match regions, while A1 counts all match parts (HSPs), as do figures B1 and B2. Target genomes are twelve Drosophila species (Dmel .. Dgri), the insect Anopheles gambia (Agam), the crustatean Daphnia pulex (Dpulx), and C. elegans (Cele). Note that Dmel, Agam, and Cele are used as both query proteomes and target genomes. Counts include many duplicate matches, to different as well as same genome locations.

Don Gilbert, 4 April 2005

Developed at the Genome Informatics Lab of Indiana University Biology Department