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Gene Function Associations in Species Genomes

Deviations in gene matches for GO categories by species genomes.

These deviations suggest where species may differ in biological function groups.
Target species genomes: Dro.mel, Dro.sim, Dro.sec, Dro.yak, Dro.ere, Dro.ana, Dro.per, Dro.pse, Dro.wil, Dro.moj, Dro.vir, Dro.gri
Source proteome: Worm [version 9g3]
Click on term for detailed information, or see here.
Term & Grouping
GO:0003677 DNA binding F : binding
GO:0003723 RNA binding F : binding
GO:0005544 calcium-dependent phospholipid binding F : binding
GO:0008289 lipid binding F : binding
GO:0020037 heme binding F : binding
GO:0048037 cofactor binding F : binding
GO:0003964 RNA-directed DNA polymerase activity F : catalytic activity
GO:0003995 acyl-CoA dehydrogenase activity F : catalytic activity
GO:0003997 acyl-CoA oxidase activity F : catalytic activity
GO:0004046 aminoacylase activity F : catalytic activity
GO:0004104 cholinesterase activity F : catalytic activity
GO:0004175 endopeptidase activity F : catalytic activity
GO:0004190 aspartic-type endopeptidase activity F : catalytic activity
GO:0004298 threonine endopeptidase activity F : catalytic activity
GO:0004559 alpha-mannosidase activity F : catalytic activity
GO:0004623 phospholipase A2 activity F : catalytic activity
GO:0008378 galactosyltransferase activity F : catalytic activity
GO:0008417 fucosyltransferase activity F : catalytic activity
GO:0008533 astacin activity F : catalytic activity
GO:0015923 mannosidase activity F : catalytic activity
GO:0016758 transferase activity, transferring hexosyl groups F : catalytic activity
GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity F : catalytic activity
GO:0001584 rhodopsin-like receptor activity F : signal transducer activity
GO:0004930 G-protein coupled receptor activity F : signal transducer activity
GO:0004970 ionotropic glutamate receptor activity F : signal transducer activity
GO:0004983 neuropeptide Y receptor activity F : signal transducer activity
GO:0008227 amine receptor activity F : signal transducer activity
GO:0005215 transporter activity F : transporter activity
GO:0005234 glutamate-gated ion channel activity F : transporter activity
Term & Grouping
GO:0008150 biological_process P :
GO:0007218 neuropeptide signaling pathway P : cellular process
GO:0006013 mannose metabolism P : physiological process
GO:0006278 RNA-dependent DNA replication P : physiological process
GO:0006310 DNA recombination P : physiological process
GO:0006334 nucleosome assembly P : physiological process
GO:0006486 protein amino acid glycosylation P : physiological process
GO:0006511 ubiquitin-dependent protein catabolism P : physiological process
GO:0006626 protein targeting to mitochondrion P : physiological process
GO:0006635 fatty acid beta-oxidation P : physiological process
GO:0006810 transport P : physiological process
GO:0006911 phagocytosis, engulfment P : physiological process
GO:0006997 nuclear organization and biogenesis P : physiological process
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota) P : physiological process
GO:0016042 lipid catabolism P : physiological process
GO:0018987 osmoregulation P : physiological process
GO:0040002 cuticle biosynthesis (sensu Nematoda) P : physiological process
GO:0040004 cuticular attachment to epithelium (sensu Nematoda) P : physiological process
GO:0042157 lipoprotein metabolism P : physiological process
GO:0045039 protein import into mitochondrial inner membrane P : physiological process
GO:0040008 regulation of growth P : regulation of biological process
Term & Grouping
GO:0016021 integral to membrane C : cell part
GO:0030117 membrane coat C : cell part
GO:0031012 extracellular matrix C : extracellular matrix
GO:0005777 peroxisome C : organelle
GO:0000786 nucleosome C : protein complex
GO:0005839 proteasome core complex (sensu Eukaryota) C : protein complex
GO:0042721 mitochondrial inner membrane protein insertion complex C : protein complex

Find crosstable statistics here.

No significant deviations for n= 514 categories.

Developed at the Genome Informatics Lab of Indiana University Biology Department