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Gene Function Associations in Species Genomes

Deviations in gene matches for GO categories by species genomes.

These deviations suggest where species may differ in biological function groups.
Target species genomes: C.elegans, Daphnia_pulex, Dro.mel, Dro.pse, Dro.vir
Source proteome: Worm [version 9g3]
Click on term for detailed information, or see here.
GO ID  
celedpuldmeldpsedvir
Term & Grouping
GO:0003674 molecular_function F :
GO:0005554 molecular_function [alt] F :
GO:0004602 glutathione peroxidase activity F : antioxidant activity
GO:0000062 acyl-CoA binding F : binding
GO:0000166 nucleotide binding F : binding
GO:0000287 magnesium ion binding F : binding
GO:0003676 nucleic acid binding F : binding
GO:0003677 DNA binding F : binding
GO:0003700 transcription factor activity F : binding
GO:0003723 RNA binding F : binding
GO:0003779 actin binding F : binding
GO:0005179 hormone activity F : binding
GO:0005506 iron ion binding F : binding
GO:0005509 calcium ion binding F : binding
GO:0005515 protein binding F : binding
GO:0005524 ATP binding F : binding
GO:0005529 sugar binding F : binding
GO:0005544 calcium-dependent phospholipid binding F : binding
GO:0008061 chitin binding F : binding
GO:0008199 ferric iron binding F : binding
GO:0008270 zinc ion binding F : binding
GO:0008289 lipid binding F : binding
GO:0020037 heme binding F : binding
GO:0046914 transition metal ion binding F : binding
GO:0050660 FAD binding F : binding
GO:0051082 unfolded protein binding F : binding
GO:0003964 RNA-directed DNA polymerase activity F : catalytic activity
GO:0003993 acid phosphatase activity F : catalytic activity
GO:0003995 acyl-CoA dehydrogenase activity F : catalytic activity
GO:0004046 aminoacylase activity F : catalytic activity
GO:0004089 carbonate dehydratase activity F : catalytic activity
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity F : catalytic activity
GO:0004175 endopeptidase activity F : catalytic activity
GO:0004179 membrane alanyl aminopeptidase activity F : catalytic activity
GO:0004180 carboxypeptidase activity F : catalytic activity
GO:0004182 carboxypeptidase A activity F : catalytic activity
GO:0004190 aspartic-type endopeptidase activity F : catalytic activity
GO:0004194 pepsin A activity F : catalytic activity
GO:0004197 cysteine-type endopeptidase activity F : catalytic activity
GO:0004198 calpain activity F : catalytic activity
GO:0004222 metalloendopeptidase activity F : catalytic activity
GO:0004245 neprilysin activity F : catalytic activity
GO:0004263 chymotrypsin activity F : catalytic activity
GO:0004295 trypsin activity F : catalytic activity
GO:0004298 threonine endopeptidase activity F : catalytic activity
GO:0004386 helicase activity F : catalytic activity
GO:0004435 phosphoinositide phospholipase C activity F : catalytic activity
GO:0004437 inositol or phosphatidylinositol phosphatase activity F : catalytic activity
GO:0004459 L-lactate dehydrogenase activity F : catalytic activity
GO:0004497 monooxygenase activity F : catalytic activity
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds F : catalytic activity
GO:0004556 alpha-amylase activity F : catalytic activity
GO:0004568 chitinase activity F : catalytic activity
GO:0004623 phospholipase A2 activity F : catalytic activity
GO:0004629 phospholipase C activity F : catalytic activity
GO:0004672 protein kinase activity F : catalytic activity
GO:0004713 protein-tyrosine kinase activity F : catalytic activity
GO:0004714 transmembrane receptor protein tyrosine kinase activity F : catalytic activity
GO:0004721 phosphoprotein phosphatase activity F : catalytic activity
GO:0004725 protein tyrosine phosphatase activity F : catalytic activity
GO:0004768 stearoyl-CoA 9-desaturase activity F : catalytic activity
GO:0004806 triacylglycerol lipase activity F : catalytic activity
GO:0004812 aminoacyl-tRNA ligase activity F : catalytic activity
GO:0004835 tubulin-tyrosine ligase activity F : catalytic activity
GO:0005006 epidermal growth factor receptor activity F : catalytic activity
GO:0008026 ATP-dependent helicase activity F : catalytic activity
GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity F : catalytic activity
GO:0008234 cysteine-type peptidase activity F : catalytic activity
GO:0008235 metalloexopeptidase activity F : catalytic activity
GO:0008237 metallopeptidase activity F : catalytic activity
GO:0008375 acetylglucosaminyltransferase activity F : catalytic activity
GO:0008378 galactosyltransferase activity F : catalytic activity
GO:0008417 fucosyltransferase activity F : catalytic activity
GO:0008483 transaminase activity F : catalytic activity
GO:0008484 sulfuric ester hydrolase activity F : catalytic activity
GO:0008533 astacin activity F : catalytic activity
GO:0008642 small protein activating enzyme activity [alt] F : catalytic activity
GO:0016291 acyl-CoA thioesterase activity F : catalytic activity
GO:0016298 lipase activity F : catalytic activity
GO:0016301 kinase activity F : catalytic activity
GO:0016491 oxidoreductase activity F : catalytic activity
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors F : catalytic activity
GO:0016615 malate dehydrogenase activity F : catalytic activity
GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors F : catalytic activity
GO:0016747 transferase activity, transferring groups other than amino-acyl groups F : catalytic activity
GO:0016757 transferase activity, transferring glycosyl groups F : catalytic activity
GO:0016758 transferase activity, transferring hexosyl groups F : catalytic activity
GO:0016789 carboxylic ester hydrolase activity F : catalytic activity
GO:0016791 phosphoric monoester hydrolase activity F : catalytic activity
GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity F : catalytic activity
GO:0016849 phosphorus-oxygen lyase activity F : catalytic activity
GO:0016874 ligase activity F : catalytic activity
GO:0016887 ATPase activity F : catalytic activity
GO:0017111 nucleoside-triphosphatase activity F : catalytic activity
GO:0042626 ATPase activity, coupled to transmembrane movement of substances F : catalytic activity
GO:0004867 serine-type endopeptidase inhibitor activity F : enzyme regulator activity
GO:0008603 cAMP-dependent protein kinase regulator activity F : enzyme regulator activity
GO:0030234 enzyme regulator activity F : enzyme regulator activity
GO:0003774 motor activity F : motor activity
GO:0003777 microtubule motor activity F : motor activity
GO:0001584 rhodopsin-like receptor activity F : signal transducer activity
GO:0003707 steroid hormone receptor activity F : signal transducer activity
GO:0004872 receptor activity F : signal transducer activity
GO:0004879 ligand-dependent nuclear receptor activity F : signal transducer activity
GO:0004888 transmembrane receptor activity F : signal transducer activity
GO:0004890 GABA-A receptor activity F : signal transducer activity
GO:0004930 G-protein coupled receptor activity F : signal transducer activity
GO:0004970 ionotropic glutamate receptor activity F : signal transducer activity
GO:0008067 metabotropic glutamate, GABA-B-like receptor activity F : signal transducer activity
GO:0008158 hedgehog receptor activity F : signal transducer activity
GO:0008227 amine receptor activity F : signal transducer activity
GO:0030594 neurotransmitter receptor activity F : signal transducer activity
GO:0003735 structural constituent of ribosome F : structural molecule activity
GO:0005198 structural molecule activity F : structural molecule activity
GO:0042302 structural constituent of cuticle F : structural molecule activity
GO:0030528 transcription regulator activity F : transcription regulator activity
GO:0005215 transporter activity F : transporter activity
GO:0005216 ion channel activity F : transporter activity
GO:0005230 extracellular ligand-gated ion channel activity F : transporter activity
GO:0005234 glutamate-gated ion channel activity F : transporter activity
GO:0005245 voltage-gated calcium channel activity F : transporter activity
GO:0005249 voltage-gated potassium channel activity F : transporter activity
GO:0005253 anion channel activity F : transporter activity
GO:0005261 cation channel activity F : transporter activity
GO:0005262 calcium channel activity F : transporter activity
GO:0005272 sodium channel activity F : transporter activity
GO:0005279 amino acid-polyamine transporter activity F : transporter activity
GO:0005328 neurotransmitter:sodium symporter activity F : transporter activity
GO:0008271 sulfate porter activity F : transporter activity
GO:0015450 protein translocase activity F : transporter activity
GO:0015662 ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism F : transporter activity
GO ID  
celedpuldmeldpsedvir
Term & Grouping
GO:0007154 cell communication P : cellular process
GO:0007155 cell adhesion P : cellular process
GO:0007156 homophilic cell adhesion P : cellular process
GO:0007165 signal transduction P : cellular process
GO:0007166 cell surface receptor linked signal transduction P : cellular process
GO:0007186 G-protein coupled receptor protein signaling pathway P : cellular process
GO:0007188 G-protein signaling, coupled to cAMP nucleotide second messenger P : cellular process
GO:0007218 neuropeptide signaling pathway P : cellular process
GO:0007223 frizzled-2 signaling pathway P : cellular process
GO:0007265 Ras protein signal transduction P : cellular process
GO:0007308 oocyte construction P : cellular process
GO:0030154 cell differentiation P : cellular process
GO:0002009 morphogenesis of an epithelium P : development
GO:0002119 larval development (sensu Nematoda) P : development
GO:0008340 determination of adult life span P : development
GO:0009790 embryonic development P : development
GO:0009792 embryonic development (sensu Metazoa) P : development
GO:0009952 anterior/posterior pattern formation P : development
GO:0040025 vulval development (sensu Nematoda) P : development
GO:0040032 post-embryonic body morphogenesis P : development
GO:0040035 hermaphrodite genitalia development P : development
GO:0045138 tail tip morphogenesis (sensu Nematoda) P : development
GO:0048856 anatomical structure development P : development
GO:0040007 growth P : growth
GO:0000132 establishment of mitotic spindle orientation P : physiological process
GO:0000184 mRNA catabolism, nonsense-mediated decay P : physiological process
GO:0006013 mannose metabolism P : physiological process
GO:0006030 chitin metabolism P : physiological process
GO:0006032 chitin catabolism P : physiological process
GO:0006072 glycerol-3-phosphate metabolism P : physiological process
GO:0006096 glycolysis P : physiological process
GO:0006100 tricarboxylic acid cycle intermediate metabolism P : physiological process
GO:0006108 malate metabolism P : physiological process
GO:0006118 electron transport P : physiological process
GO:0006120 mitochondrial electron transport, NADH to ubiquinone P : physiological process
GO:0006278 RNA-dependent DNA replication P : physiological process
GO:0006310 DNA recombination P : physiological process
GO:0006412 protein biosynthesis P : physiological process
GO:0006418 tRNA aminoacylation for protein translation P : physiological process
GO:0006464 protein modification P : physiological process
GO:0006468 protein amino acid phosphorylation P : physiological process
GO:0006470 protein amino acid dephosphorylation P : physiological process
GO:0006486 protein amino acid glycosylation P : physiological process
GO:0006508 proteolysis P : physiological process
GO:0006511 ubiquitin-dependent protein catabolism P : physiological process
GO:0006512 ubiquitin cycle P : physiological process
GO:0006519 amino acid and derivative metabolism P : physiological process
GO:0006520 amino acid metabolism P : physiological process
GO:0006629 lipid metabolism P : physiological process
GO:0006631 fatty acid metabolism P : physiological process
GO:0006633 fatty acid biosynthesis P : physiological process
GO:0006730 one-carbon compound metabolism P : physiological process
GO:0006810 transport P : physiological process
GO:0006812 cation transport P : physiological process
GO:0006814 sodium ion transport P : physiological process
GO:0006816 calcium ion transport P : physiological process
GO:0006817 phosphate transport P : physiological process
GO:0006821 chloride transport P : physiological process
GO:0006826 iron ion transport P : physiological process
GO:0006836 neurotransmitter transport P : physiological process
GO:0006865 amino acid transport P : physiological process
GO:0006879 iron ion homeostasis P : physiological process
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota) P : physiological process
GO:0007018 microtubule-based movement P : physiological process
GO:0007051 spindle organization and biogenesis P : physiological process
GO:0007582 physiological process P : physiological process
GO:0007606 sensory perception of chemical stimulus P : physiological process
GO:0008152 metabolism P : physiological process
GO:0008219 cell death P : physiological process
GO:0008272 sulfate transport P : physiological process
GO:0008643 carbohydrate transport P : physiological process
GO:0009072 aromatic amino acid family metabolism P : physiological process
GO:0009190 cyclic nucleotide biosynthesis P : physiological process
GO:0009396 folic acid and derivative biosynthesis P : physiological process
GO:0015031 protein transport P : physiological process
GO:0015671 oxygen transport P : physiological process
GO:0016042 lipid catabolism P : physiological process
GO:0016246 RNA interference P : physiological process
GO:0016477 cell migration P : physiological process
GO:0016998 cell wall catabolism P : physiological process
GO:0018987 osmoregulation P : physiological process
GO:0019538 protein metabolism P : physiological process
GO:0030001 metal ion transport P : physiological process
GO:0030421 defecation P : physiological process
GO:0035046 pronuclear migration P : physiological process
GO:0040004 cuticular attachment to epithelium (sensu Nematoda) P : physiological process
GO:0040011 locomotion P : physiological process
GO:0040016 embryonic cleavage P : physiological process
GO:0043062 extracellular structure organization and biogenesis P : physiological process
GO:0044262 cellular carbohydrate metabolism P : physiological process
GO:0045167 asymmetric protein localization during cell fate commitment P : physiological process
GO:0006355 regulation of transcription, DNA-dependent P : regulation of biological process
GO:0030334 regulation of cell migration P : regulation of biological process
GO:0040010 positive regulation of growth rate P : regulation of biological process
GO:0040015 negative regulation of body size P : regulation of biological process
GO:0040018 positive regulation of body size P : regulation of biological process
GO:0040027 negative regulation of vulval development (sensu Nematoda) P : regulation of biological process
GO:0045449 regulation of transcription P : regulation of biological process
GO:0046662 regulation of oviposition P : regulation of biological process
GO:0050819 negative regulation of coagulation P : regulation of biological process
GO:0000003 reproduction P : reproduction
GO:0007276 gametogenesis P : reproduction
GO:0007626 locomotory behavior P : response to stimulus
GO:0007631 feeding behavior P : response to stimulus
GO:0009613 response to other organism [alt] P : response to stimulus
GO:0018991 oviposition P : response to stimulus
GO:0046677 response to antibiotic P : response to stimulus
GO ID  
celedpuldmeldpsedvir
Term & Grouping
GO:0005737 cytoplasm C : cell part
GO:0005743 mitochondrial inner membrane C : cell part
GO:0005887 integral to plasma membrane C : cell part
GO:0016020 membrane C : cell part
GO:0016021 integral to membrane C : cell part
GO:0045211 postsynaptic membrane C : cell part
GO:0005578 extracellular matrix (sensu Metazoa) C : extracellular matrix
GO:0031012 extracellular matrix C : extracellular matrix
GO:0005576 extracellular region C : extracellular region
GO:0005634 nucleus C : organelle
GO:0005764 lysosome C : organelle
GO:0005783 endoplasmic reticulum C : organelle
GO:0005794 Golgi apparatus C : organelle
GO:0000786 nucleosome C : protein complex
GO:0005839 proteasome core complex (sensu Eukaryota) C : protein complex
GO:0005840 ribosome C : protein complex
GO:0005875 microtubule associated complex C : protein complex
GO:0005891 voltage-gated calcium channel complex C : protein complex
GO:0005941 unlocalized protein complex C : protein complex
GO:0008076 voltage-gated potassium channel complex C : protein complex
GO:0016459 myosin complex C : protein complex
GO:0030286 dynein complex C : protein complex
GO:0043234 protein complex C : protein complex
 
celedpuldmeldpsedvir

Find crosstable statistics here.

No significant deviations for n= 310 categories.

Developed at the Genome Informatics Lab of Indiana University Biology Department