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Index of /species/data/acyr/exonerate

      Name                       Last modified       Size  Description

[DIR] Parent Directory 18-Jul-2008 15:12 - [   ] acyr-exonr-daph4a.gff3.gz 12-Jun-2008 19:04 613k [   ] acyr-exonr-daph5a.gff3.gz 15-Jun-2008 14:53 1.0M [   ] acyr-exonr-nasv4a.gff3.gz 12-Jun-2008 17:07 779k [   ] acyr-exonr-nasv5a.gff3.gz 15-Jun-2008 14:53 1.2M [   ] acyr-exonr-tribc5b.gff3.gz 30-Jun-2008 18:40 2.0M [   ] dpulex1_gnomon.aa.gz 20-Jun-2008 13:23 6.3M [   ] nasv1_gnomon.aa.gz 20-Jun-2008 13:24 6.2M [   ] tcas3_gleangenes.aa.gz -


acyr-exonr-*.gff3 : exonerate mapping of proteins to acyr 1.0 genome
 -daph : daphnia pulex genes
 -nasv : nasonia vitrip. genes
 -trib : tribolium cas. (version tcas3) genes
 version 5a : exonerate -refine region mode (better mapping)
 version 4a : exoneate fast mode (genes are often mapped to many nearby parts)

proteins mapped:
  dpulex1_gnomon.aa : daphnia pulex genes predicted by Gnomon
  nasv1_gnomon.aa   : nasonia vit. genes predicted by Gnomon

Developed at the Genome Informatics Lab of Indiana University Biology Department