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Syt2 Gene Detail
 Symbol
Name
ID
Syt2
synaptotagmin II
MGI:99666


Nomenclature History
Genetic Map
Chromosome 1
73.5 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 4)

Sequence Map
Chr1:136605877-136649726 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Syt2 ± 2 cM)
Protein SuperFamily: B/K protein/synaptotagmin
TreeFam: TF315600
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000029462 VEGA Gene Model | MGI Sequence Detail 43850 C57BL/6J ± Kb
transcript NM_009307 RefSeq | MGI Sequence Detail 3386 C57BL/6
polypeptide P46097 UniProt | EBI | MGI Sequence Detail 422 Not Applicable
For the selected sequences
All sequences(31)
Phenotypes All phenotypic alleles(2) : Targeted, other(1) Chemically induced(1)
Polymorphisms RFLP(2) SNPs within 2kb(744 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
Process transport
Component cell junction, cytoplasmic vesicle...
Function calcium ion binding, calcium-dependent phospholipid binding...
All GO classifications(15)
Expression Literature Summary: (6 records)
Data Summary: Assays (1)    Results (94)    Tissues (94)    Images (14)
Theiler Stages: 22
  Assay Type Assays   Results
      RNA in situ 1   94
cDNA source data(8)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Other database
links
Ensembl Gene Model ENSMUSG00000026452
DoTS DT.101347413, DT.55164625, DT.99823174
UniGene 5102
PDB 2NP0
DFCI TC1587594, TC1587914, TC1647342, TC1669655
NIA Mouse Gene Index U000833
Entrez Gene 20980
VEGA Gene Model OTTMUSG00000029462
Gene Traps CMHD-GT_315F07-3, OST389528
Protein
domains
InterPro ID Description
IPR000008 C2 calcium-dependent membrane targeting
IPR001565 Synaptotagmin
IPR015428 Synaptotagmin 1,2
Graphical View of Protein Domain Structure
Molecular
reagents
All nucleic(11) cDNA(10) Primer pair(1)
References
(Earliest) J:1973 Willison K, "The mouse Brachyury gene and mesoderm formation." Trends Genet 1990 Apr;6(4):104-5
(Latest) J:134988 Liu Y et al., "Essential roles of the acetylcholine receptor {gamma}-subunit in neuromuscular synaptic patterning." Development 2008 Jun;135(11):1957-67
All references(21)
Other
accession IDs
MGD-MRK-16451, MGI:2138727

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
01/06/2009
MGI_4.13
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The Jackson Laboratory