About   Help   FAQ
Stat5a Gene Detail
 Symbol
Name
ID
Stat5a
signal transducer and activator of transcription 5A
MGI:103036


Nomenclature History
Synonyms STAT5
Genetic Map
Chromosome 11
60.5 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 6)

Sequence Map
Chr11:100720665-100746483 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; rat; sheep    (Mammalian Orthology)
Comparative Map (Mouse/Human Stat5a ± 2 cM)
Protein SuperFamily: signal transducer and transcription activator STAT5A
TreeFam: TF318648
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000002125 VEGA Gene Model | MGI Sequence Detail 25819 C57BL/6J ± Kb
transcript NM_011488 RefSeq | MGI Sequence Detail 3884 -
polypeptide P42230 UniProt | EBI | MGI Sequence Detail 793 Not Applicable
For the selected sequences
All sequences(32)
Phenotypes All phenotypic alleles(4) : Targeted, knock-out(3) Targeted, other(1)
Mice homozygous for disruptions in this gene are reduced in size and display abnormalities in both mammary gland structure and function.
Polymorphisms RFLP(1) SNPs within 2kb(78 from dbSNP Build 128)   SNPs within 2kb including multiple locations(86)
Gene Ontology
(GO)
classifications
Process 2-oxoglutarate metabolic process, allantoin metabolic process...
Component cytoplasm, nucleus...
Function calcium ion binding, DNA binding...
All GO classifications(60)
Expression Literature Summary: (12 records)
Data Summary: Assays (4)    Results (77)    Tissues (74)    Images (3)
Theiler Stages: 2,3,4,5,17,21,23,28
  Assay Type Assays   Results
      RT-PCR 2   61
      RNA in situ 2   16
cDNA source data(65)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Other database
links
Ensembl Gene Model ENSMUSG00000004043
UniGene 277403
PDB 1Y1U
NIA Mouse Gene Index U013347
Entrez Gene 20850
VEGA Gene Model OTTMUSG00000002125
Protein
domains
InterPro ID Description
IPR000923 Blue (type 1) copper domain
IPR000980 SH2 motif
IPR001217 STAT transcription factor, core
IPR011992 EF-Hand type
IPR012345 STAT transcription factor, DNA-binding, subdomain
IPR013799 STAT transcription factor, protein interaction
IPR013800 STAT transcription factor, all-alpha
IPR013801 STAT transcription factor, DNA-binding
Graphical View of Protein Domain Structure
Molecular
reagents
All nucleic(68) Genomic(1) cDNA(65) Primer pair(2)
References
(Earliest) J:24359 Mui AL et al., "Interleukin-3, granulocyte-macrophage colony stimulating factor and interleukin-5 transduce signals through two STAT5 homologs." EMBO J 1995 Mar 15;14(6):1166-75
(Latest) J:142128 Kerenyi MA et al., "Stat5 regulates cellular iron uptake of erythroid cells via IRP-2 and TfR-1." Blood 2008 Nov 1;112(9):3878-88
All references(142)
Other
accession IDs
MGD-MRK-23874, MGI:2144052

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
01/08/2009
MGI_4.13
Web browser compatibility
The Jackson Laboratory