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Pou6f1 Gene Detail
 Symbol
Name
ID
Pou6f1
POU domain, class 6, transcription factor 1
MGI:102935


Nomenclature History
Synonyms 2310038G18Rik, cns-1, Emb
Genetic Map
Chromosome 15
56.6 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 9)

Sequence Map
Chr15:100405749-100416796 bp, - strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Pou6f1 ± 2 cM)
TreeFam: TF350705
Sequences
Representative Sequences Length Strain/Species Flank
genomic 19009 NCBI Gene Model | MGI Sequence Detail 11048 C57BL/6J ± Kb
transcript NM_010127 RefSeq | MGI Sequence Detail 4575 -
polypeptide Q07916 UniProt | EBI | MGI Sequence Detail 301 Not Applicable
For the selected sequences
All sequences(37)
Polymorphisms RFLP(3) SNPs within 2kb(92 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
Process regulation of transcription, regulation of transcription, DNA-dependent...
Component nucleus
Function DNA binding, sequence-specific DNA binding...
All GO classifications(8)
Expression Literature Summary: (1 records)
Data Summary: Assays (3)    Results (63)    Tissues (32)    Images (6)
Theiler Stages: 17,21,28
  Assay Type Assays   Results
      RNA in situ 3   63
cDNA source data(18)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Other database
links
Ensembl Gene Model ENSMUSG00000009739
DoTS DT.101286825, DT.101735309, DT.482248, DT.490046, DT.55194006
DFCI TC1587483, TC1594116, TC1597665, TC1601467, TC1606438, TC1756250
NIA Mouse Gene Index U036668
Entrez Gene 19009
Protein
domains
InterPro ID Description
IPR000327 POU-specific
IPR001356 Homeobox
IPR012287 Homeodomain-related
IPR013847 POU
Graphical View of Protein Domain Structure
Molecular
reagents
All nucleic(22) Genomic(3) cDNA(19)
References
(Earliest) J:3981 Dowbenko D et al., "Structure and chromosomal localization of the murine gene encoding GLYCAM 1. A mucin-like endothelial ligand for L selectin." J Biol Chem 1993 Feb 25;268(6):4525-9
(Latest) J:91257 Gray PA et al., "Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis." Science 2004 Dec 24;306(5705):2255-2257
All references(14)
Other
accession IDs
MGD-MRK-23769, MGI:1914205, MGI:2146292

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
01/08/2009
MGI_4.13
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The Jackson Laboratory