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Ednrb Gene Detail
 Symbol
Name
ID
Ednrb
endothelin receptor type B
MGI:102720


Nomenclature History
Synonyms ETb, Sox10m1
Genetic Map
Chromosome 14
51.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 30)

Sequence Map
Chr14:104213843-104242913 bp, - strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Ednrb ± 2 cM)
Protein SuperFamily: endothelin receptor
TreeFam: TF331292
Sequences
Representative Sequences Length Strain/Species Flank
genomic 13618 NCBI Gene Model | MGI Sequence Detail 29071 C57BL/6J ± Kb
transcript NM_007904 RefSeq | MGI Sequence Detail 3989 C57BL/6
polypeptide P48302 UniProt | EBI | MGI Sequence Detail 442 Not Applicable
For the selected sequences
All sequences(70)
Phenotypes All phenotypic alleles(38) : Targeted, knock-out(2) Targeted, other(6) Spontaneous(3) Chemically induced(12) Radiation induced(17)
Homozygotes for null mutations have pigmentation limited to small patches on the head and rump, exhibit abnormal neural epithelium of the inner ear, and die from megacolon resulting from impaired neuronal migration and aganglia.
Associated Human Diseases (3)   Alleles Annotated to Human Diseases (3)   Phenotype Images (8)  
Polymorphisms All PCR and RFLP(4) : PCR(1) RFLP(3) SNPs within 2kb(84 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
Process G-protein coupled receptor protein signaling pathway, melanocyte differentiation...
Component integral to membrane, membrane...
Function endothelin receptor activity, endothelin-B receptor activity...
All GO classifications(22)
Expression Literature Summary: (21 records)
Data Summary: Assays (3)    Results (22)    Tissues (18)
Theiler Stages: 18,23,25,26,28
  Assay Type Assays   Results
      RT-PCR 2   16
      Northern blot 1   6
cDNA source data(124)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Other database
links
Ensembl Gene Model ENSMUSG00000022122
DoTS DT.101129975, DT.101212651, DT.40167075, DT.94152189, DT.94215927, DT.97408483
UniGene 229532
Entrez Gene 13618
Protein
domains
InterPro ID Description
IPR000276 GPCR, rhodopsin-like
IPR000499 Endothelin receptor
IPR001112 Endothelin B receptor
IPR017452 GPCR, rhodopsin-like superfamily
Graphical View of Protein Domain Structure
Molecular
reagents
All nucleic(127) Genomic(1) cDNA(124) Primer pair(2)
References
(Earliest) J:23183 Dunn LC, "Types of white spotting in mice" Am Naturalist 1920 Nov-Dec;54():465-95
(Latest) J:140320 Druckenbrod NR et al., "Targeting of endothelin receptor-B to the neural crest." Genesis 2008 Aug;46(8):396-400
All references(121)
Other
accession IDs
MGD-MRK-14268, MGD-MRK-19624, MGI:2145744

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
01/08/2009
MGI_4.13
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The Jackson Laboratory