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Lhx3 Gene Detail
 Symbol
Name
ID
Lhx3
LIM homeobox protein 3
MGI:102673


Nomenclature History
Synonyms Lim3, mLim-3, P-LIM
Genetic Map
Chromosome 2
16.0 cM, cytoband A2-C1
Detailed Genetic Map ± 1 cM
 
Mapping data( 5)

Sequence Map
Chr2:26055732-26063769 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; dog, domestic; pig, domestic; rat; guinea pig    (Mammalian Orthology)
Comparative Map (Mouse/Human Lhx3 ± 2 cM)
TreeFam: TF315442
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000012728 VEGA Gene Model | MGI Sequence Detail 8038 C57BL/6J ± Kb
transcript NM_001039653 RefSeq | MGI Sequence Detail 2208 C57BL/6
polypeptide P50481 UniProt | EBI | MGI Sequence Detail 400 Not Applicable
For the selected sequences
All sequences(25)
Phenotypes All phenotypic alleles(2) : Targeted, knock-out(1) Targeted, other(1)
Homozygotes for a targeted null mutation exhibit failure of growth and differentiation of Rathke's pouch, lack both anterior and intermediate lobes of the pituitary gland, and die perinatally, within 24 hours of birth.
Polymorphisms RFLP(1) SNPs within 2kb(48 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
Process cell differentiation, dorsal/ventral pattern formation...
Component nucleus
Function DNA binding, metal ion binding...
All GO classifications(19)
Expression Literature Summary: (77 records)
Data Summary: Assays (14)    Results (189)    Tissues (136)    Images (39)
Theiler Stages: 13,15,17,19,20,21,22,24,28
  Assay Type Assays   Results
      RNA in situ 10   177
      Immunohistochemistry 4   12
cDNA source data(17)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Other database
links
Ensembl Gene Model ENSMUSG00000026934
UniGene 386765
PDB 2JTN
DFCI TC1583743, TC1594343, TC1596887
NIA Mouse Gene Index U022415
Entrez Gene 16871
VEGA Gene Model OTTMUSG00000012728
Protein
domains
InterPro ID Description
IPR001356 Homeobox
IPR001781 Zinc finger, LIM-type
IPR012287 Homeodomain-related
Graphical View of Protein Domain Structure
Molecular
reagents
All nucleic(27) Genomic(4) cDNA(19) Primer pair(1) Other(3) Antibodies(3)
References
(Earliest) J:22277 Seidah NG et al., "The mouse homeoprotein mLIM-3 is expressed early in cells derived from the neuroepithelium and persists in adult pituitary." DNA Cell Biol 1994 Dec;13(12):1163-80
(Latest) J:142425 Gaston-Massuet C et al., "Genetic interaction between the homeobox transcription factors HESX1 and SIX3 is required for normal pituitary development." Dev Biol 2008 Dec 15;324(2):322-33
All references(96)
Other
accession IDs
MGD-MRK-19576

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
01/08/2009
MGI_4.13
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