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Lhx4 Gene Detail
 Symbol
Name
ID
Lhx4
LIM homeobox protein 4
MGI:101776


Nomenclature History
Synonyms Gsh-4, Gsh4
Genetic Map
Chromosome 1
82.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 6)

Sequence Map
Chr1:157548851-157584736 bp, - strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Lhx4 ± 2 cM)
Protein SuperFamily: homeotic protein lim-3
TreeFam: TF315442
Sequences
Representative Sequences Length Strain/Species Flank
genomic 16872 NCBI Gene Model | MGI Sequence Detail 35886 C57BL/6J ± Kb
transcript NM_010712 RefSeq | MGI Sequence Detail 1853 -
polypeptide P53776 UniProt | EBI | MGI Sequence Detail 390 Not Applicable
For the selected sequences
All sequences(13)
Phenotypes All phenotypic alleles(1) : Targeted, knock-out(1)
Polymorphisms RFLP(2) SNPs within 2kb(183 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
Process anti-apoptosis, medial motor column neuron differentiation...
Component nucleus
Function DNA binding, metal ion binding...
All GO classifications(17)
Expression Literature Summary: (16 records)
Data Summary: Assays (7)    Results (179)    Tissues (138)    Images (39)
Theiler Stages: 17,21,22,24,26,28
  Assay Type Assays   Results
      RNA in situ 7   179
cDNA source data(7)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Other database
links
Ensembl Gene Model ENSMUSG00000026468
DoTS DT.87047006
UniGene 103624
DFCI TC1591698
NIA Mouse Gene Index U021920
Entrez Gene 16872
Protein
domains
InterPro ID Description
IPR001356 Homeobox
IPR001781 Zinc finger, LIM-type
IPR012287 Homeodomain-related
Graphical View of Protein Domain Structure
Molecular
reagents
All nucleic(11) Genomic(1) cDNA(9) Primer pair(1)
References
(Earliest) J:1775 Singh G et al., "Identification of 10 murine homeobox genes." Proc Natl Acad Sci U S A 1991 Dec 1;88(23):10706-10
(Latest) J:134683 Tian G et al., "Expression and function of the LIM homeobox containing genes Lhx3 and Lhx4 in the mouse placenta." Dev Dyn 2008 May;237(5):1517-25
All references(29)
Other
accession IDs
MGD-MRK-10287, MGD-MRK-10292, MGD-MRK-18583

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
01/08/2009
MGI_4.13
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The Jackson Laboratory