OrthoMCL clustering of proteins among arthropod genomes

See this Summary of Arthropod ortholog clusters , and Phylogenetic trees from clusters: Fitch:phenogram, Neighor:tree

Search Arthropod gene clusters

for:

>Limit to genes in these taxa

Mosquitoes	Fruitflies	Hymenoptera
Other insects	Other arthropods

>Limit to genes in these species

 Name                               Last modified       Size  Description

 Parent Directory                   15-Jun-2009 13:44      -  
 genetrees/                         12-Jan-2010 15:10      -  
 arthropod-orthomcl.txt             10-Jan-2009 14:04    10k  Summary of arthropod OrthoMCL results
 arthropod_ogene3.consensus_def.txt 25-Aug-2008 17:18   1.3M  Ar'pod gene group consensus definitions
 arthropod_ogenesum4.ugp.txt.gz     24-Aug-2008 16:34   4.3M  Ar'pod gene group results, as UGP keyed text
 arthropod_ogenesum4.ugp.xml.gz     24-Aug-2008 16:29   4.5M  Ar'pod gene group results, as Gene Page XML
 arthropod-orthomcl-fitchpheno.pdf  12-Aug-2008 18:10    12k  Phenogram of Fitch of OrthoMCL distances
 arthropod-orthomcl-neitree.pdf     12-Aug-2008 17:33    12k  Phylo tree of Neighbor of OrthoMCL distances


Citations:  
  D. Gilbert, OrthoMCL clustering among 13 arthropod proteomes.
  http://insects.eugenes.org/arthropods/
  Aug. 2008, gilbertd@indiana.edu

  OrthoMCL: http://www.orthomcl.org/
   Li Li, Christian J. Stoeckert, Jr., and David S. Roos
   OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes. Genome Res. 2003 13: 2178-2189. 
   Feng Chen, Aaron J. Mackey, Jeroen K. Vermunt, and David S. Roos
   Assessing Performance of Orthology Detection Strategies Applied to Eukaryotic Genomes. PLoS ONE 2007 2(4): e383.

Developed at the Genome Informatics Lab of Indiana University Biology Department