euGenes/Arthropods About BLAST Gene Search Maps Data DroSpeGe

Index of /arthropods/data

      Name                    Last modified       Size  Description

[DIR] Parent Directory 15-Jun-2009 12:44 - [   ] aedes - [   ] anopheles - [DIR] aphid/ 26-Dec-2008 20:59 - [DIR] apis/ 27-Aug-2008 08:49 - [   ] culex - [DIR] daphnia/ 27-Aug-2008 08:50 - [DIR] ixodes/ 01-Dec-2009 19:02 - [DIR] nasonia/ 04-Feb-2010 14:57 - [   ] pediculus - [DIR] polymorphism/ 23-Sep-2008 20:23 - [DIR] proteomes/ 12-Aug-2008 14:03 - [DIR] silkworm/ 05-Dec-2009 18:18 - [DIR] summaries/ 05-Dec-2009 19:44 - [   ] tribolium -

                              Source data notes, Aug 2008
..SPECIES   N  ............ NOTES .................. SOURCE   ....................
    Aphid  37994 genes     6500 <40aa, few alt-tr (NCBI Gnomon)
        Aphid notes: ~4000 TE-genes, ~25000 with EST or protein match
    Aedes  16789 genes                            (Vecbase)
     Apis  17182 genes     2700 <40aa             (NCBI Gnomon)
Anopheles  13134 genes                            (Vecbase)
    Culex  18883 genes                            (Vecbase/Broad)
       Culex notes:  10693 Named proteins, 7414 conserved hypothetic prot.,
         539 hypothetical, 237 predicted (last is only group w/o evidence)
       see http://www.broad.mit.edu/annotation/genome/culex_pipiens.4/GeneFinding.html   
  Daphnia  31952 genes     1900 <40aa, few alt-tr (wFleaBase/NCBI Gnomon)    
      Daphnia notes:  ~600 TE genes, ~17000 with EST or protein match
  Nasonia  27287 genes     2100 <40aa, few alt-tr (NCBI Gnomon)
      Nasonia notes:  12563 with protein or EST match
  DrosMel  20513 genes     includes ~6000 alt-tr  (Ref 5)         
  DrosMoj  17950 genes     4800 <40aa             (NCBI Gnomon CAF1)
  DrosPse  19259 genes     1100 <40aa             (NCBI Gnomon CAF1)
   Ixodes  17742 genes                            (Vecbase/JCVI)    
Pediculus  11198 genes                            (Vecbase)
Tribolium  16422 genes                            (Beetlebase rel3)


Developed at the Genome Informatics Lab of Indiana University Biology Department