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Arthropod Species Genomes BLAST


        See also: PSI-BLAST of Arthropod gene groups

Choose Species genomes, Feature type and Blast Program:

Species genomes:
Daphnia waterflea [S,P] Ixodes tick [P]   Acyrthosiphon Pea aphid [S,E,P]
Aedes mosquito [P] Anopheles mosquito [P] Culex mosquito [P] Pediculus louse [P]
Apis honeybee [P] Nasonia wasp [S,P] Tribolium beetle [P]
Drosophila melanogaster [C,E,G,P]
Dmel rel5 [C]
Drosophila pseudoobscura [C,E,G,P] Drosophila mojavensis [S,E,P]

Feature type     Program

Genome data key: C = published Chromosomes (may be partial); S = preliminary assembly Scaffolds; G = genome Genes; P = genome Proteins; E = EST/cDNA; - = no data yet


Enter sequence below in FASTA format

Or load it from disk


   

The query sequence is filtered for low complexity regions by default.
Filter Low complexity Mask for lookup table only

Expect    Matrix Perform ungapped alignment

Query Genetic Codes (blastx only)
Frame shift penalty for blastx

Other advanced options:     


Collapse Alignments    Alignment view
Descriptions    Alignments Color schema


Developed at the Genome Informatics Lab of Indiana University Biology Department