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DroSpeGe: Drosophila Species Genomes

Drosophila-phylogeny

This service provides a preview of Drosophila genome data, with genome maps and BLAST sequence search, for these species. It includes prepublication, as well as published, Drosophila genomes from collaborating NGHRI-funded Genome Sequencing Centers .

Abbrv. Species Sequencing Center
Dana Drosophila ananassae Agencourt Bioscience Corporation
Dere Drosophila erecta Agencourt Bioscience Corporation
Dgri Drosophila grimshawi Agencourt Bioscience Corporation
Dmel Drosophila melanogaster BDGP / Celera
Dmoj Drosophila mojavensis Agencourt Bioscience Corporation
Dper Drosophila persimilis Broad Institute
Dpse Drosophila pseudoobscura Human Genome Sequencing Center, Baylor College of Medicine
Dsec Drosophila sechellia Broad Institute
Dsim Drosophila simulans Genome Sequencing Center, Washington University
Dvir Drosophila virilis Agencourt Bioscience Corporation
Dwil Drosophila willistoni J. Craig Venter Institute
Dyak Drosophila yakuba Genome Sequencing Center, Washington University
  Transcriptome expression   Preliminary DrosMel tile expression gene predictions (Affymetrix, modEncode) : 2008-May
  waterflea Daphnia genome   This new arthropod genome offers a comparative outgroup to insects: 2007-July
  Gene gain/loss in GO groups     Potential gains and losses in Gene Ontology groups are found for species. New analysis: 2006-Dec
  About DroSpeGe paper   DroSpeGe: Rapid access database for new Drosophila species genomes. NAR database issue, 2007
  2000 New D.mel Genes & Exons     Preliminary phylogenetic assessment of missing D. melanogaster genes and exons. 2006-Aug
  BioMart : DroSpeGe     a tool for mining homologies and annotations of Drosophila genomes. Updated 2006-Aug
  TeraGrid "flies" fast for genomes     Fruitfly genomes are analyzed rapidly on US TeraGrid shared cyberinfrastructure 2006-June
  Common Chromosomes     Overview of Muller Elements and Synteny in Drosophila Genomes 2006-Feb
  Twelve Genomes !     Twelve Drosophila species genomes with over 2 Billion nucleotides. (D. willistoni map) 2006-Feb

Please mail your comments and help requests to drospege @ eugenes.org.
This project is supported by a grant to D. Gilbert from the National Human Genome Research Institute of the National Institutes of Health .
Developed at the Genome Informatics Lab of Indiana University Biology Department